Pathology EMR Software

Top Pathology EMR Software Buyer's Guide 2025

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by June Levine
Last Updated: Nov 04, 2025

Ultimate Guide To Pathology EMR Software

Pathology EMR Software is specifically designed to support pathologists through a set of robust tools that help to identify diseases through biopsy samples and autopsy. It empowers pathologists to make quick decisions and diagnose patients by streamlining clinical and administrative operations. Pathology is a complex practice and a standard EMR software system may not provide the right features to help improve patient care.

What Are The Features Of Pathology EMR Software?

Pathology EMR software solution will have the following key features that provide optimal benefit to pathology practices.

Lab Connectivity

This feature is the most important for pathologists as a diagnosis is dependent on lab examinations and results. Lab integrations allow pathologists to connect with the major labs to ensure that orders can be sent and received quickly to improve the diagnosis process.

EHR Software Alerts

The Pathology EMR software alerts feature helps improve patient safety. Alerts like dosage, drug-to-drug interaction, and drug-allergy alerts help improve the quality of care as healthcare providers are constantly informed of any potential threats without delay.

Coding and Billing

The integrated medical billing solution offered by Pathology EMR Software should be ready for ICD-10 to ensure precise and correct coding and billing.

Integrated Practice Management Software

Integrated Practice Management (PM) software solutions offered by pathology EMR Software enable healthcare providers to track performance through extensive reporting facilities and, as a result, provide complete practice solutions.

How To Choose A Pathology EMR Software Vendor

There are a few factors to consider before selecting a Pathology EMR Software vendor. These will help your decision-making process:

Practice Size

EMR vendors offer different services suitable for different practice sizes. If you have a mid-sized practice, you will look for vendors that offer EMR solutions specifically for your practice size. Your goal will not be to look for EMR vendors that support single-practitioner clinics and operations.

System Design

Most EMR vendors provide both on-premises and cloud-based solutions to their customers. The choice depends on the customer’s preference for the deployment offered. Most practices prefer a cloud-based system as the software can be used on any device and from any place. This enables practice on the go without having to worry about accessibility issues.

Certification

Any EMR Software solution should offer security and protection of sensitive patient data. HIPAA Compliance is paramount for the pathologist to ensure the security of patient records around the clock.

Ultimate Guide To Electronic Medical Records (EHR) Software

Electronic Medical Records (EMR) software systems are an electronic way of keeping patient medical records. You can store anything from patient charts, medical history, bloodwork, payment schedules, and billing in your EMR. Also known as Electronic Health Records (EHR), they provide an added functionality where patient demographics, histories, and similarities can be tracked, as well as prescriptions, medication SOAP notes, and much more.

Since the HITECH Act introduced Meaningful Use (MU), the medical and healthcare industry has been in a flurry to find an EMR/EHR system to suit their practice. Transitioning from paper to electronic recording of patient histories and administrative documents wasn’t easy, but the benefits to the future of healthcare of implementing EHR outweigh the drudge work of the present:

  • EMR software promotes efficiency and a smoother workflow
  • It increases revenue through well-documented claims
  • It increases revenue through increased patient inflow
  • Decreased stationery costs
  • It improves care coordination
  • Patient information is safe and secure from natural disasters
  • Streamlining healthcare practices across the country

What is Electronic Medical Records (EMR) Software?

What Are Medical Practices Looking For?

Meaningful Use (MU) has dropped the bomb, leaving healthcare practices no choice but to convert their practice to an EHR system. But it’s up to you to select the EMR software vendor that best suits your needs. So now that you’re in the market, you either:

  1. Have no clue what you’re looking for.
  2. Know exactly what you want, but don’t know where to get it.
  3. Are you considering investing in software specifically designed for your practice?

Although #3 is ideal, it costs a lot to hire an IT department and support system to cater to the practice’s needs, especially for a small to medium-sized clinic. For #1 and #2, we have a brief guide to help you find the perfect vendor for you.

Latest EMR Software Comparison 2021

What to Look For in a Potential Vendor

Security

Patient privacy is a paramount concern for any physician. Providers need to ensure the vendor they choose is HIPAA compliant at all times and that patient information is secure. All the vendors are aware of the necessity of security, and many provide data encryption technology to enhance the security in their software.

Practice Size

Medical practices come in all shapes and sizes. Some are single-doctor private practices, while others are large hospitals with branches all over the country that need one system to sync all the records. Unfortunately, one software does not fit all. Single-specialty software will not be able to accommodate the load of a larger practice, while multiple-clinician software will be useless and unnecessarily expensive for the single doctor. There are EHR software vendors that provide services for a specific range of doctors per practice. Make sure that the vendor you’re interested in is equipped to provide services to a practice of your size.

Specific Services

One of the decisions your practice will have to make is whether you want just an EMR system or one with an integrated Practice Management (PM) system for billing and scheduling. There are advantages to having both together, but there have been cases where some practices only go for one if they had unique requirements that a vendor could not fulfill, or they had already paid a hefty amount for a PM system and weren’t looking to replace it yet.

Ease of Use and Training

Doctors are not IT professionals, and though some might be tech-savvy, it would be egregious to expect them all to be experts on EHR software. Ease of use is essential to make the transition from paper to electronic smooth, as well as the day-to-day practice to go along without a hitch. If the software is too complicated and hard to understand, it’s a waste of precious time and needlessly aggravating. Some vendors offer free training, while others charge a nominal sum.

Specialty Specific

Not all specialties are created equal, so why must their software be generic? Basic EMR software works well and is good for general practice and most specialties, but doctors have complained that specialty-specific software is not available in the market. The specialty- specific EHR software has inbuilt recording systems that make specialty practices function efficiently. Only a few vendors provide specialty-specific software, so there aren’t many to choose from. But more vendors are cottoning on to the demand, and there should be more options shortly.

Support

Support is a major issue most practices have with their current vendors. A good support team can make small glitches and major roadblocks easy to maneuver, while a bad one will make things worse. Some EMR software vendors provide support as part of the plan you’re already paying for, while others charge extra for support. Scout the market, read reviews, or ask point-blank if there will be a special support team assigned to each practitioner and whether you’ll be charged for the service.

Mobility

Smartphones have changed the dynamics of mobile usage. Handheld devices are easy to carry around and can be used for a number of purposes. Most people are ditching the cumbersome PC for a handheld device. Doctors mostly use iPads or Tablets in the examination room to take down patient symptoms, check the history, and note down the prescription, so the vendor must have a mobile application that is synced with all the mobile devices being used in the practice.

Market Trends to Be Aware Of

Like anything else, the EMR software industry is also subject to constant changes. From new technology to legalities and governing bodies, everything is constantly changing. Here are some of the changes I think it would do well for you to keep track of.

Meaningful Use Changes

At a recent healthcare conference, Andy Slavitt, the administrator of the Centers for Medicare & Medicaid Services, declared that Meaningful Use (MU) was over and would be replaced by the end of this year with something better. But a deeper look into the claims revealed that meaningful use would very much still be there, only much improved.

The new measures aim to make the reporting and benchmarking for reaching the required reports much easier and less stringent than under Meaningful Use, along with other changes. Yet it is safe to say that none of these changes will make an impact until the end of 2017.

Cloud-Based Services

Recent research found that only 25% of practitioners are interested in a web-based model and only 50% are willing to have it as an initial model that eventually transitions to cloud-based.
Cloud-based EMR software cuts down on steep upfront costs for client servers and can be hosted on any device that has a web browser. It’s no surprise that more and more vendors are transitioning to cloud-based software because the industry demands are changing.

Latest MIPS Changes To Follow in 2021

Features To Look For In An EHR Software

Electronic Medical Records Electronic health records software (EHR) is a software that assists in developing and storing patient medical records digitally. This unique system assists physicians in tracking patient histories, notes, medications, and demographics. The most popular features of EHR software include e-prescribing, E&M coding advice, and SOAP notes. Quality Electronic Health Records Software (EHR) also offers lab integration, voice recognition, tablet support, and device integration.
Medical Billing Medical billing modules or Medical Billing software manage the development of patient statements and submission of insurance claims. Key functions of such systems include claim scrubbing, e-claim submission, coding, payment posting, eligibility inquiry, and reporting.
Patient Scheduling This module is designed to automate the entire process of scheduling patient appointments. Core features of a good patient scheduling module may include sending reminders through phone, text message, and email, automated followups, and multilocation support. Such modules are usually offered along with a billing module in a practice management software suite.
Radiology Information Systems A radio information system (RIS) manages the workflow and operations of radiology imaging centers or large medical practices with radiology imaging departments. Such EHR Software or modules automate the entire process of storing, operating, and distributing patient medical images and related data.
Picture Archiving and Communications Systems PACS is designed to manage, store, and retrieve DICOM images. Such systems are often used in combination with a RIS (Radio Information System) to perform the radiology workflow proficiently.
Medical Accounting Medical accounting refers to a system designed to automate accounting processes for medical practices. Major functions of such systems include general ledger, A/P, A/R, and financial reporting.

What You Need To Know About EMR Software

Today, over 600 companies provide EHR/EMR and Practice Management Software, and with this growing competition, selecting the right electronic medical records software or practice management software is always a very difficult choice. EMRFinder understands your problem and provides a complete and comprehensive catalog of specialty-specific potential EMR Software, perfect for your practice needs. There are many things to be considered when thinking about using or switching your current Electronic Health Records Software (EHR Software). This buyer’s guide covers every necessary aspect to consider before making a final decision.

The term EMR Software or EHR Software (Electronic Health Records) is used for the electronic documentation and maintenance of medical records for patients via a computer or a mobile device. EHR Software essentially improves the efficiency of practice by helping to make more accurate documentation of the encounters, resulting in improved profitability. Its usability has been recognized, and it became a part of the Health Information Technology for Economic and Clinical Health Act (HITECH) in 2004.

Pathology EMR Software Benefits

Besides financial profitability, practices have seen the following benefits of using EHR/EMR Software:

  • Improved practice efficiency
  • Streamlined administrative tasks
  • Improved profitability and revenue cycle (Medical Billing Services)
  • Improved Patient Engagement (via Patient Portal)
  • Decreased stationary costs
  • Improved collections due to more organized claims
  • Automated alerts and reminders help patients return to the office when necessary and notify the practice about any potential risk.
  • Enhanced Security and Safety (Cloud Storage & Back-ups) – Cloud-based EMR Software

EMR Software by Specialty

Specialty-specific software enables physicians and other medical professionals to store detailed clinical information, such as demographics, medical history, social history, lab reports,Ā etc.

Specialty-specific EMR Software or EHR Software must be fairly customizable to the unique style and documentation requirements since all medical practices have a specific need based on the background and medical specialty. For example, Pain Management or Dermatology-specific EMR software should include the ability to store before/after photos and annotate images. Similarly, specialties like Pediatrics, Oncology, Podiatry, Ophthalmology, Neurology, Nephrology, Dialysis Centers, Rheumatology, and Chiropractic Care require their unique set of features to simplify adoption.

Pathology EMR Software by Practice Size

Because of the massive adaptability requirement, not every EMR Software is suitable for any practice. An EMR Software designed for hospitals or multi-provider clinics does not necessarily support a solo or a small practice. So, what are the factors that will make an EHR Software vendor viable for your medical practice?

From solo to large providers and multi-specialty clinics, every practice has its unique set of challenges that must be addressed by the Electronic Medical Records (EMR) software vendor some of which are listed below.

Small or Solo Provider Practices

Small or solo practices with small office space and a limited number of staff members are generally short on the budget compared to larger practices. Due to these constraints, many providers simply prefer cloud-based EMR software and employ Free EMR Software or choose an affordable EHR Software vendor with a low fixed monthly fee.

Medium-Sized Practices

Often belonging to the same medical specialty, the medium-sized practices require unique features such as interoperability, dedicated customer support, multi-device support as well as extensive reporting functionality to keep an eye on the overall performance of the practice, as their budget is also comparatively larger.

Large Practices

Larger group practices generally comprise more than fifteen or often twenty medical providers. These practices usually provide medical services that fall under various medical specialties (Orthopedics, Pain Management, Surgery, Chiropractic Medicine, Family Medicine,Ā etc.). Therefore, these practices require support for multiple users to access the system simultaneously, as well as for theĀ Scheduling software to accommodate multiple locations, providers, and resources such as dialysis chairs, procedure room allocation, etc. These practices also keep replacing or adding staff members and need a scalable solution.

Hospitals or Enterprise Organizations

Hospitals or enterprise organizations have the most elaborate list of requirements, which are usually documented in the form of an RFI or RFP to assess and shortlist vendors that can meet them.

Hospitals or enterprises are often the target market of EMR software companies such as Athenahealth, McKesson, Epic, Cerner, eClinicalWorks, Allscripts, NextGen, drChrono, and Meditech,Ā etc. and they usually provide ideal EHR software solutions for larger corporations such as ACOs, PCMH, IPAs, CINs (Clinically Integrated Networks), and Public Health Departments, etc. These EMR software companies usually offer features like integration with multiple other software and medical devices, inventory management modules, interface with local labs (LIS), machines and diagnostic equipment along with drug dispensing (pharmacy management software), electronic medication administration record (EMAR), etc.

Tips to Consider When Choosing an EMR Vendor

Electronic Medical Records (EMR) consist of various software, all with different functionalities and applications. Here are a few tips one should consider before selecting an EMR Software:

Security

Safety and security of patient data and medical records is a principal concern for not only clinicians and medical providers but their patients as well. A strong EMR Software ensures the safety and security of medical records and all the related patient information and guarantees HIPAA Compliance providing them privacy (especially during the patient’s communication with their doctor via Patient Portal). Top EMR Software Vendors from today (AdvancedMD, PrognoCIS, Modernizing Medicine, Chirotouch, Kareo, etc.) use data encryption technologies and other advanced tools in every section of the EMR Software to make sure that they safeguard patient records.

Cloud-Based EMR software

Due to its various advantages, Cloud-based EMR has grown more popular among physicians lately. Cloud-based EHR software is mostly device-independent and supports multiple devices such as Smartphones (iPhones and Android phones) iPhones, iPads, desktop computers, and laptops. The EMR software can be accessed from any location at any time provided that internet access is available. The Cloud-based EHR Software technology usually requires minimum or no maintenance or upfront cost making it ideal for doctors running small clinics and private practices. Some of the Cloud-based EMR Software vendors include ChartPerfect, Care Cloud, AllegienceMD, CureMD, ChartLogic, etc. The move to the public cloud for healthcare is vital in the current changing landscape. For practices that don’t adopt new cloud services, the old inferior feature set coupled with the higher prices will hinder the business dramatically. This gulf between the old software and the new cloud-based software will only grow more exponentially as time goes on.

ONC-ATCB Certified EMR Software

One of the characteristics of strong EMR software is that it is ONC-ATCB certified and complies with the guidelines and protocols defined by the Office of the National Coordinator (ONC). The software vendors who comply with these measures go through severe testing and conform at a benchmark level set by the federal body. This testing ensures that all areas of the software are checked for example Patient Portal, the way the software communicates with Pharmacies via E-prescription (e-Rx), HIEs, labs, hospitals, etc. Most of the EHR software vendors nowadays have all the details related to their compliance with the standards established by the ONC (Click here) present online.

Specialty EHR software

Certain specialty-specific Electronic Health Records (EHR) systems must offer unique tools for that specialty for clinical documentation. For example for gastroenterology, the EMR system should include specific tools that should be able to document clinical workflow and specify the area of concern (e.g. issues concerning the GI tract) and must offer much more than capturing raw data or text. (Gastroenterology EMR Software).

Specific Services

When selecting an EMR System, one of the basic and most important decisions that you need to make is whether you want the EMR Software solution by itself or integrated with a Practice Management System for scheduling and billing. Having an integrated EHR and PM solution has its pros, yet there have been instances where practices chose an EHR software by themselves, as they had some unique needs that EMR Software vendors could not meet or they had already made large payments for separate Practice Management solutions and could not replace it were bound to use it.

Integrated Practice Management Software

With competition rising every day in the field of healthcare IT, many EHR Vendors who provide integrated Practice Management solutions included in the software bundle easily outclass competitors with standalone EMR Software including the ones that offer a specialty-specific EMR Solution. EHR software providers with integrated Practice Management systems often tend to offer widespread reporting competencies to monitor how the practice performs and manages administrative tasks better.

Integrated Medical Billing Software

Medical practices need to have a strong billing system to be able to communicate with insurance companies and charge for all the services rendered. Medical Billing Software works best when integrated with EMR software. The clinical documentation complies with all the mandatory standards and forms a financial document that is sent electronically to insurance carriers or financiers so that they can validate and process it at their end. This helps streamline operations and various administrative tasks and makes sure everyone is on the same page where financial matters are concerned. By using the Medical billing Software system, practices can produce patient statements, confirm patient eligibility, generate claims, and much more. Medical billing solutions integrated with EMRs prove to be ideal for healthcare organizations who wish to manage to bill in-house.

Hidden Cost

Different EMR Vendors offer varying prices. Some EMR Software sellers offer their services for free, while others provide specialty services for extremely high costs. In both cases, there always might be chances of several hidden costs that might be revealed later. When selecting an EHR Software, make sure you finalize your budget and discuss all the hidden costs included in the contract with your potential vendors. Also, make sure you ask them about the charges for services such as support and training.

Ease of Use and Training

Though some doctors and physicians might be very proficient with technology, at the end of the day, they are not IT professionals. They always prefer software that is easy to use, so that not only their transition process from their existing systems (paper or existing EHR) is smooth, but also their everyday experience with their Electronic Health Records software goes without any hindrances. An EMR System that is too complicated to understand can waste a lot of time resulting in users being aggravated. Also, some EMR companies provide users with training free of cost, so at the time of selecting an EMR software, make sure that you ask the vendor to train you and other staff members of the practice to have a better grasp of the software and if there will be any additional costs involved for training.

Specialty-Based EMR Software

All medical providers work in their distinctive manner and have unique needs according to their specialties. Therefore, most of the EMR Software Vendors today ensure that their EHR Software is specially tailored for a specific specialty or several specialties. This was a predictable conclusion of the EMR Software journey, as more and more healthcare providers were required to switch to Electronic Medical Records (EMR) systems. Most of the EHR software companies then were essentially focused on selling their software to all healthcare providers regardless of their specialties. However, the specialty-based medical providers soon realized that the software did not meet the requirements of their practices. Therefore, the demand for specialty-specific EMR systems increased. To meet that demand, EMR software vendors started producing specialty-specific EHR software, and as a result, today there are several unique EMR systems available for almost all specialties like Cardiology, Anesthesiology, Family Medicine, Orthopedics, Urology, Optometry, Pulmonology, General Surgery, Alternative & Holistic Medicine, etc.

Customer Support Quality

When you adopt EHR software for your practice, it eases your routine tasks and helps your practice in so many different ways. But what will you do when your software faces a technical issue? It is normal for any software application to malfunction from time to time. This is when you should pick up your phone and contact the customer service representative of your EMR software service provider. An efficient customer support service addresses all of your concerns and issues and tries to resolve them in a knowledgeable and skilled way. Only a customer service rep can understand the issues or changes in the behavior of your Electronic Health Records software application and then the rep can pass on your concerns to the appropriate department to get your issue fixed. A good customer service representative always ensures customer satisfaction. On the other hand, a bad and rude customer rep will only make things worse. Most of the EMR software vendors provide customer support as a part of the plan that you are paying for, while some of them charge extra for this service. Before implementing an EHR software, you should make it clear with the vendor if there will be a special support team assigned to the practitioner within the package or not.

Latest in Pathology EMR Software

As of 2023, pathology Electronic Medical Record (EMR) software has seen significant advancements, driven by technological innovations and evolving healthcare needs. In 2021, the FDA approved the first AI-based digital pathology system, Paige Prostate, which integrates with EMR platforms to assist in diagnosing prostate cancer, marking a milestone in AI adoption in pathology. This approval accelerated the integration of AI and machine learning into pathology EMR software, enabling features like automated image analysis and predictive diagnostics.

In 2022, the adoption of cloud-based pathology EMR solutions surged, with companies launching platforms that offer scalable, secure, and collaborative environments for pathologists. These systems facilitate real-time data sharing and remote diagnostics, which became critical during the COVID-19 pandemic.

Additionally, the rise of whole-slide imaging (WSI) technology, which gained FDA approval for primary diagnosis in 2017, has been increasingly integrated into EMR systems, allowing pathologists to digitize and analyze slides remotely. Interoperability improvements, driven by the 21st Century Cures Act (2020), have also pushed vendors to ensure seamless data exchange between pathology EMRs, LIS, and hospital EMRs.

In 2024, major EMR providers like Epic and Cerner expanded their pathology modules to include advanced analytics and customizable reporting, addressing the growing demand for data-driven insights in diagnostic workflows.

These developments highlight the ongoing transformation of pathology EMR software into a more efficient, accurate, and collaborative tool for modern healthcare.

Latest in EHR Software News

athenaOne: A Powerful Medical App Loved by Doctors

Developed by athenahealth EHR Software, athenaOne is among the top rated medical apps on the Apple App Store. athenaOne has garnered this reputation largely due to the many benefits and conveniences which it offers, through its robust set of tools and features.

Its ease of use and intuitive user interface has made it a favourite among US healthcare providers, helping practices beat industry benchmarks. Doctors have noted faster workflows, which allow them to quickly complete notes and place orders.

athenaOne currently sits at a 4.6-star rating on Apple’s App Store, and is more than powerful enough to support healthcare providers through their day!